Skip to main content

ImSwitch OS (based on Forklift)

The ImSwitch ImSwitch OS is a complete, pre-configured operating system image designed specifically for UC2 microscopy systems. It provides a ready-to-use environment with all software, drivers, and configurations pre-installed.

Images and Screenshots​

The ImSwitch OS comes with a visual installer and desktop environment:

ImSwitch OS Desktop ImSwitch OS desktop environment with pre-installed applications

ImSwitch Configuration ImSwitch configuration interface for hardware setup

ImSwitch Docker Interface Docker containers running ImSwitch services

Overview​

The ImSwitch OS is a specialized Raspberry Pi OS image that includes:

  • ImSwitch with all dependencies pre-installed
  • UC2-REST Python interface for ESP32 communication
  • UC2-ESP32 firmware flashing tools
  • Docker with pre-built ImSwitch containers
  • Camera drivers for supported hardware
  • Configuration templates for common setups
  • Web interface for remote control

Features​

Pre-Installed Software​

  • ImSwitch Core: Latest stable version with all modules
  • Docker Environment: Pre-built containers ready to run
  • UC2-REST Library: Python interface for hardware control
  • Firmware Tools: ESP32 flashing utilities and firmware
  • Development Tools: Python, Git, VS Code Server (optional)

Hardware Support​

  • Cameras: HIK, Daheng, Raspberry Pi, USB cameras
  • Motors: UC2-ESP32 controlled stages and focus systems
  • Illumination: LED arrays, lasers, matrix displays
  • Sensors: Environmental monitoring, feedback systems

Network Features​

  • WiFi Hotspot: Create isolated network for microscope control
  • Web Interface: Browser-based control panel (Cockpit)
  • SSH Access: Remote terminal access
  • VNC Server: Remote desktop access

Installation​

Requirements​

  • Raspberry Pi 4 (4GB RAM minimum, 8GB recommended)
  • MicroSD Card (32GB minimum, Class 10 or better)
  • UC2 Hardware (optional for initial setup)

Step 1: Download Image​

# Download the latest Forklift OS image or go to Zenodo and download it here https://zenodo.org/records/14988987
wget https://zenodo.org/records/14988987/files/rpi-uc2-27f9a21.zip?download=1

Step 2: Flash to SD Card​

Using Raspberry Pi Imager (Recommended):

  1. Download Raspberry Pi Imager
  2. Select "Use custom image" and choose the downloaded .img.xz file
  3. Select your SD card
  4. Click "Write" and wait for completion

Using dd (Linux/macOS):

# Extract image
xz -d imswitch-forklift-os.img.xz

# Flash to SD card (replace /dev/sdX with your SD card device)
sudo dd if=imswitch-forklift-os.img of=/dev/sdX bs=4M status=progress
sync

Step 3: First Boot​

  1. Insert SD card into Raspberry Pi
  2. Power on the Raspberry Pi
  3. Observe for an SSID with name openuc2-XXX-XXX-XXX

Configuration​

Initial Setup​

Access Methods:

  • SSH: ssh pi@openuc2-xxxx-xxxx-xxx.local (default password: youseetoo, default login: pi )
  • Web Interface: http://imswitch-pi.local:8001

Default Credentials:

  • Username: pi
  • Password: youseetoo
  • SSH: Enabled by default

Network Configuration​

WiFi Hotspot Mode:

# Enable hotspot mode (creates isolated network)
sudo systemctl enable hostapd
sudo systemctl enable dnsmasq

# Configure hotspot settings
sudo nano /etc/hostapd/hostapd.conf

Client Mode (Connect to existing WiFi):

# Use the desktop WiFi settings or command line
sudo raspi-config

ImSwitch Configuration​

For detailed information about ImSwitch configuration files, see the Configuration Guide.

Quick Start Configuration:

# Navigate to configuration directory
cd /home/pi/ImSwitchConfig

# Copy a template configuration
Configuration files are stored in `/home/pi/Documents/ImSwitchConfig/config/` and can be edited using the desktop interface or via SSH. 

# Edit configuration for your hardware
nano config/imcontrol_options.json #=> enter the name you want to use

Usage​

Web Interface​

The Forklift OS includes a web-based control interface accessible at:

  • Local: http://localhost:8001
  • Network: http://opencu2-XXX-xxx-xxx.local:8001

Web Interfaces​

The ImSwitch OS provides several web interfaces for remote access:

  • Cockpit Web Console: Available at http://[raspberry-pi-ip]:9090 for system administration
  • ImSwitch React Interface: Available at http://[raspberry-pi-ip]:8001/imswitch/index.html for microscope control
  • WebSocket Control: Available at http://[raspberry-pi-ip]:8002 for real-time data streams actually it's https by default to connect to it via a statically hosted website e.g. https://youseetoo.github.io/imswitch/index.html

Features:

  • Live camera feed
  • Motor control
  • LED/laser control
  • Configuration management
  • System monitoring

System Management​

Update ImSwitch:

forklift pallet upgrade --force @main

Advanced Features​

Custom Configurations​

Hardware Configuration:

# Edit hardware configuration
nano /home/pi/ImSwitchConfig/imcontrol_setups/my_setup.json

# Set as active configuration
echo '{"setupFileName": "my_setup.json"}' > /home/pi/ImSwitchConfig/config/imcontrol_options.json

Scripting:

# Custom scripts directory
ls /home/pi/ImSwitchConfig/scripts/

# Add your custom scripts
cp my_script.py /home/pi/ImSwitchConfig/scripts/

Troubleshooting​

Common Issues​

Check docker compose is running:

docker ps

Docker Compose Services​

The ImSwitch OS includes a pre-configured docker-compose setup with the following services:

version: '3.8'
services:
  imswitch:
    image: ghcr.io/openuc2/imswitch-noqt-x64:latest
    ports:
      - "8001:8001"
      - "2222:22"
    environment:
      - HEADLESS=1
      - HTTP_PORT=8001
      - CONFIG_FILE=example_uc2_hik_flowstop.json
      - UPDATE_GIT=0
      - UPDATE_CONFIG=0
    volumes:
      - /home/pi/Documents/ImSwitchConfig:/config
      - /home/pi/Documents/ImSwitchData:/data
    privileged: true
    restart: unless-stopped

  portainer:
    image: portainer/portainer-ce:latest
    ports:
      - "9000:9000"
    volumes:
      - /var/run/docker.sock:/var/run/docker.sock
      - portainer_data:/data
    restart: unless-stopped

volumes:
  portainer_data:

This setup provides:

  • ImSwitch: Main microscopy control application
  • Portainer: Docker container management interface
  • Persistent Data: Configuration and data volumes for data retention

Hardware not detected:

# Check USB devices
lsusb

# Check serial ports
ls /dev/tty*

# Check permissions
sudo usermod -a -G dialout pi

Network issues:

# Check network status
ip addr show

# Restart network services
sudo systemctl restart dhcpcd
sudo systemctl restart hostapd

Log Files​

Important log locations:

  • ImSwitch: /home/pi/.imswitch/logs/
  • System: /var/log/syslog
  • Docker: journalctl -u imswitch-docker

Recovery​

Reset to defaults:

# Reset ImSwitch configuration
rm -rf /home/pi/ImSwitchConfig/config/*
# then restart imswitch

Updates and Maintenance​

Manual Updates​

For manual updates, use the provided update script:

# Update ImSwitch Docker containers
bash ~/Desktop/update_docker_container.sh

# Or manually pull latest images
sudo docker-compose down
sudo docker pull ghcr.io/openuc2/imswitch-noqt-x64:latest
sudo docker-compose up -d

Update Components​

# Update ImSwitch configuration files
cd /home/pi/Documents/ImSwitchConfig
git pull origin master

# Update UC2-REST library
pip install --upgrade UC2-REST

# Update ESP32 firmware tools
cd /home/pi/uc2-esp32
git pull origin main

Support and Resources​

Getting Help​

Next Steps​

After setting up Forklift OS:

  1. Configure your hardware - Set up specific devices
  2. Basic usage tutorial - Learn ImSwitch operation
  3. Advanced tutorials - Explore advanced features